Hey Dan,
Any chance I can get pics or a diagram of your manifold?
I'm working on plumbing now too (need to build a manifold?).
I was recommended by Jeff at Lifereef to do a manifold, and use basic flexi-acrylic tubing for the output to the sump.
He said that while clear, flexi tubing collects algaes, it is worth it to be able to see if there are obstructions in the line and the flexible is easier to work with, maintain, keep from having problems, etc.